Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818245.1_cds_XP_016499540.1_13455
CDS Infomation

[gene=LOC107818116] [db_xref=GeneID:107818116] [protein=BTB/POZ domain-containing protein POB1-like isoform X2] [protein_id=XP_016499540.1] [location=complement(join(18655..19468,19999..20278,20602..20665,20757..20878,22230..22352,23486..23741))] [gbkey=CDS]
Sequence

ATGAAGGACCAGAATTTGGACCTATTCGACCCGAGAACGGCTGTAATGGACCCCGAATTC
TCCCCAACCAGTACCCGGGAACCCGATTTCGCTTTTGCCTTCAACGATAGCAACTTCTCC
GACCGTGTCCTCCGGATCGAGATCATCGGCGACTCGCTCGACGGCGACGGCGACTCTGAT
TCTCACGGCTGCCACAGCCTTGCTGATTGGGCGCGTAATCGCAAGCGCCGCCGTGAAGAT
TTCAAAAAGGAAAATGCTTTGGATATCACAGCATGCCCTGAAGAGCAGATAATAAGCTGT
AACCAAATTGATAGTGAAGATGCTGATAATGAAAATCAAGACGAATCAGTTGTTGCAATG
ATTGAAGAGCCAAACTCAGGAGATGAAGCTGCTAACAGTGACGATTCAACTTGGAACTGT
GATTCTCCAAGAGTTATAAAAGTTAAAACATTACACATTAGCTCCCCCATTTTAGCAGCA
AAGAGTCCATTTTTCTACAAGCTCTTTTCAAATGGGATGAAAGAGTCTGAGCAAAGACAA
GTAACTCTGCGGATTAATGCTTCAGAGGAAGCTGCATTGATGGAGCTCCTGAATTTCATG
TATAGCAATACATTAACTACAAGTACAGCTCCTGCTTTGCTGGATGTACTCATGGCTGCT
GACAAATTTGAGGTTGCTTCTTGCATGCGGTATTGCAGCCGGCTATTACGCAATTTGCCT
ATGACTCCGGAGTCAGCGTTGCTGTATTTGGAGCTTCCTTCTAGTGTCCTGATGGCTGAA
GCAGTTCAGCCATTGACCGATACAGCAAAACAATTCCTAGCTGCAAGATACAAAGATATA
ACCAAGTTTCAAGAAGAGGTCATGAAGTTACCTCTTGCTGGTATTGAGGCAATTTTGTCC
AGTGATGACCTCCAGGTGGCATCAGAAGATGCCGTATATGACTTTGTCTTGAAGTGGACA
AGGGCTCATTATCCCCAGATAGACGAACGGCGAGACATTCTTAGTTCAAGACTTGGGCAT
TGCATCCGTTTTCCTTTCATGAGCTGCCGAAAGCTTCGGAAGGTTCTCACATGTAATGAC
TTCGAACATGAGTTTTCATCCAAGCTTGTGCTTGAGGCCCTCTTTTTTAAAGCTGAGGCC
CCTCACCGTCAGCGAACTCAAGCTGCTGAAGAATCAGCTTCGTCTAGTCGTCGTTTTGTC
GAACGTGCATATAAGTATCGGCCTGTTAAGGTGGTTGAGTTTGAACTTCCACGGCACCAA
TGTATAGTCTACTTGGATCTTAAGCGGGACGAATGTGCTAATCTGTTTCCATCTGGGAGA
GTATATTCTCAAGCTTTTCATTTGGGTGGGCAAGGGTTTTTCCTATCCGCACATTGCAAC
ATGGATCAGCAAAGCTCTTTCCATTGTTTTGGTCTCTTTCTTGGAATGCAGGAAAAGGGT
TCAGTTTCATTTGCAGTTGATTATGAATTTGCTGCAAGGACAAAACCAGCAGAGGAGTAT
GTCAGCAAATACAAAGGGAACTACACTTTTACTGGGGGTAAGGCAGTTGGCTACCGCAAC
TTATTTGCCATACCATGGACTTCTTTCATGGCTGAGGACAGTCTCTATTTTATTAACGGC
GTACTCCATCTCAGGGCTGAACTTACTATCAGGCACTGA

Peptide Sequence

PEP ID

XP_016499540.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein POB1-like isoform X2 [Nicotiana tabacum]
Sequence

MKDQNLDLFDPRTAVMDPEFSPTSTREPDFAFAFNDSNFSDRVLRIEIIGDSLDGDGDSD
SHGCHSLADWARNRKRRREDFKKENALDITACPEEQIISCNQIDSEDADNENQDESVVAM
IEEPNSGDEAANSDDSTWNCDSPRVIKVKTLHISSPILAAKSPFFYKLFSNGMKESEQRQ
VTLRINASEEAALMELLNFMYSNTLTTSTAPALLDVLMAADKFEVASCMRYCSRLLRNLP
MTPESALLYLELPSSVLMAEAVQPLTDTAKQFLAARYKDITKFQEEVMKLPLAGIEAILS
SDDLQVASEDAVYDFVLKWTRAHYPQIDERRDILSSRLGHCIRFPFMSCRKLRKVLTCND
FEHEFSSKLVLEALFFKAEAPHRQRTQAAEESASSSRRFVERAYKYRPVKVVEFELPRHQ
CIVYLDLKRDECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKG
SVSFAVDYEFAARTKPAEEYVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDSLYFING
VLHLRAELTIRH

Transcript Sequence

Gene sequence data has not been registered.